The association between GABA-shunt and circadian rhythm directs salt stress responses in Nicotiana tabaccum L.

dc.contributor.author Rabia Çakarız
dc.contributor.author Şerife Palabıyık
dc.contributor.author Tülay Alp Öztürk
dc.contributor.author Melike Bor
dc.contributor.author I. Turkan
dc.date.accessioned 2025-10-06T17:48:33Z
dc.date.issued 2025
dc.description.abstract Gamma amino butyric acid (GABA) is a neurotransmitter inhibitor molecule functioning in the central nervous system of mammals found in all the suprachiasmatic nucleus (SCN) and has a critical role in refining circadian rhythm since the SCN sends signals to peripheral clocks for synchronization. GABA may function in plants in a similar way to animals in relation to circadian rhythm. Previously we found that GABA biosynthesis was affected at transcriptional level in Nicotiana tabaccum under drought stress during 24 h periodicity. In the light of these findings we hypothesized that GABA might be an internal cue for circadian rhythm and disruption of this interaction by different stresses might affect phase rhythms in tobacco. We conducted experiments with N. tabaccum plants under salt stress in 72 h periodicity. Physiological parameters along with GABA content GAD and GABA-T activities were measured and the transcript profiles of genes related to the morning central and evening loops of the circadian rhythm were also analyzed. According to our findings under control conditions GABA-shunt was found to be associated with CCA1 PRR7 TOC PRR3 and GI while H<inf>2</inf>O<inf>2</inf> content was negatively correlated with GABA catabolism. Salt stress reversed the daily rhythm of GABA biosynthesis (day and night cycle) as compared to the control plants. The morning and the night/central genes’ transcript abundances were impaired during day-night transitions in salt-stressed groups. Moreover under salt stress GABA catabolism was associated more with the morning phase genes and the correlation between GABA-shunt and the circadian rhythm was adversely affected. It is possible that increased H<inf>2</inf>O<inf>2</inf> content under salt stress may also play a regulatory role in this interplay. © 2025 Elsevier B.V. All rights reserved.
dc.identifier.doi 10.1016/j.plantsci.2025.112552
dc.identifier.issn 18732259, 01689452
dc.identifier.issn 0168-9452
dc.identifier.uri https://www.scopus.com/inward/record.uri?eid=2-s2.0-105004900389&doi=10.1016%2Fj.plantsci.2025.112552&partnerID=40&md5=5e1255f76e842641160ea36e04ecedde
dc.identifier.uri https://gcris.yasar.edu.tr/handle/123456789/7985
dc.language.iso English
dc.publisher Elsevier Ireland Ltd
dc.relation.ispartof Plant Science
dc.source Plant Science
dc.subject Abiotic Stress, Circadian Rhythm, Gaba, Salinity, Tobacco, 4 Aminobutyric Acid, Gamma-aminobutyric Acid, 4 Aminobutyric Acid, Circadian Rhythm, Gene Expression Regulation, Genetics, Metabolism, Nicotiana, Physiology, Salt Stress, Circadian Rhythm, Gamma-aminobutyric Acid, Gene Expression Regulation Plant, Salt Stress
dc.subject 4 aminobutyric acid, circadian rhythm, gene expression regulation, genetics, metabolism, Nicotiana, physiology, salt stress, Circadian Rhythm, gamma-Aminobutyric Acid, Gene Expression Regulation Plant, Salt Stress
dc.title The association between GABA-shunt and circadian rhythm directs salt stress responses in Nicotiana tabaccum L.
dc.type Article
dspace.entity.type Publication
gdc.bip.impulseclass C5
gdc.bip.influenceclass C5
gdc.bip.popularityclass C4
gdc.coar.type text::journal::journal article
gdc.collaboration.industrial false
gdc.description.startpage 112552
gdc.description.volume 357
gdc.identifier.openalex W4410246973
gdc.identifier.pmid 40348343
gdc.index.type Scopus
gdc.oaire.diamondjournal false
gdc.oaire.impulse 2.0
gdc.oaire.influence 2.4031086E-9
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gdc.oaire.keywords Nicotiana
gdc.oaire.keywords Gene Expression Regulation, Plant
gdc.oaire.keywords Salt Stress
gdc.oaire.keywords gamma-Aminobutyric Acid
gdc.oaire.keywords Circadian Rhythm
gdc.oaire.keywords Salinity
gdc.oaire.keywords GABA
gdc.oaire.keywords Circadian rhythm
gdc.oaire.keywords Tobacco
gdc.oaire.keywords Abiotic stress
gdc.oaire.popularity 4.0111643E-9
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gdc.openalex.collaboration National
gdc.openalex.fwci 3.8123
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gdc.openalex.toppercent TOP 10%
gdc.opencitations.count 0
gdc.plumx.crossrefcites 1
gdc.plumx.mendeley 4
gdc.plumx.scopuscites 1
person.identifier.scopus-author-id Çakarız- Rabia (59893269100), Palabıyık- Şerife (59329465100), Öztürk- Tülay Alp (59328795100), Bor- Melike (7003854062), Turkan- I. (6602343431)
project.funder.name This work was supported by grant-in-aid FYL-2021\u201323116 from Ege University Research Foundation.
publicationvolume.volumeNumber 357
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