The association between GABA-shunt and circadian rhythm directs salt stress responses in Nicotiana tabaccum L.

dc.contributor.author Rabia Cakariz
dc.contributor.author Serife Palabiyik
dc.contributor.author Tulay Alp Ozturk
dc.contributor.author Melike Bor
dc.contributor.author Ismail Turkan
dc.contributor.author Turkan, Ismail
dc.contributor.author Ozturk, Tulay Alp
dc.contributor.author Bor, Melike
dc.contributor.author Palabiyik, Serife
dc.contributor.author Cakariz, Rabia
dc.date AUG
dc.date.accessioned 2025-10-06T16:21:39Z
dc.date.issued 2025
dc.description.abstract Gamma amino butyric acid (GABA) is a neurotransmitter inhibitor molecule functioning in the central nervous system of mammals found in all the suprachiasmatic nucleus (SCN) and has a critical role in refining circadian rhythm since the SCN sends signals to peripheral clocks for synchronization. GABA may function in plants in a similar way to animals in relation to circadian rhythm. Previously we found that GABA biosynthesis was affected at transcriptional level in Nicotiana tabaccum under drought stress during 24 h periodicity. In the light of these findings we hypothesized that GABA might be an internal cue for circadian rhythm and disruption of this interaction by different stresses might affect phase rhythms in tobacco. We conducted experiments with N. tabaccum plants under salt stress in 72 h periodicity. Physiological parameters along with GABA content GAD and GABA-T activities were measured and the transcript profiles of genes related to the morning central and evening loops of the circadian rhythm were also analyzed. According to our findings under control conditions GABA-shunt was found to be associated with CCA1 PRR7 TOC PRR3 and GI while H2O2 content was negatively correlated with GABA catabolism. Salt stress reversed the daily rhythm of GABA biosynthesis (day and night cycle) as compared to the control plants. The morning and the night/central genes' transcript abundances were impaired during day-night transitions in salt-stressed groups. Moreover under salt stress GABA catabolism was associated more with the morning phase genes and the correlation between GABA-shunt and the circadian rhythm was adversely affected. It is possible that increased H2O2 content under salt stress may also play a regulatory role in this interplay.
dc.description.sponsorship This work was supported by grant-in-aid FYL-2021-23116 from Ege University Research Foundation.
dc.description.sponsorship Ege University Research Foundation
dc.description.sponsorship Ege University Research Foundation [FYL-2021-23116]
dc.identifier.doi 10.1016/j.plantsci.2025.112552
dc.identifier.issn 0168-9452
dc.identifier.issn 1873-2259
dc.identifier.scopus 2-s2.0-105004900389
dc.identifier.uri http://dx.doi.org/10.1016/j.plantsci.2025.112552
dc.identifier.uri https://gcris.yasar.edu.tr/handle/123456789/6989
dc.identifier.uri https://doi.org/10.1016/j.plantsci.2025.112552
dc.language.iso English
dc.publisher ELSEVIER IRELAND LTD
dc.relation.ispartof Plant Science
dc.rights info:eu-repo/semantics/closedAccess
dc.source PLANT SCIENCE
dc.subject Circadian rhythm, Salinity, Tobacco, GABA, Abiotic stress
dc.subject ACID GABA, ARABIDOPSIS, CLOCK, METABOLISM, MUTANT, PARAMETERS, TOLERANCE, SEEDLINGS, GLUTAMATE, PATHWAY
dc.subject Salinity
dc.subject Gaba
dc.subject Tobacco
dc.subject Circadian Rhythm
dc.subject Abiotic Stress
dc.title The association between GABA-shunt and circadian rhythm directs salt stress responses in Nicotiana tabaccum L.
dc.type Article
dspace.entity.type Publication
gdc.author.id BOR, MELIKE/0000-0002-0170-2800
gdc.author.id Cakariz Gonul, Rabia/0000-0003-0731-4478
gdc.author.scopusid 59893269100
gdc.author.scopusid 59328795100
gdc.author.scopusid 6602343431
gdc.author.scopusid 59329465100
gdc.author.scopusid 7003854062
gdc.author.wosid BOR, MELIKE/K-5981-2014
gdc.author.wosid Gonul, Rabia/NQF-1166-2025
gdc.bip.impulseclass C5
gdc.bip.influenceclass C5
gdc.bip.popularityclass C4
gdc.coar.type text::journal::journal article
gdc.collaboration.industrial false
gdc.description.department
gdc.description.departmenttemp [Cakariz, Rabia; Palabiyik, Serife; Ozturk, Tulay Alp; Bor, Melike; Turkan, Ismail] Univ Ege, Fac Sci, Dept Biol Izmir, TR-35100 Bornova, Turkiye; [Turkan, Ismail] Yasar Univ, Fac Agr Sci & Technol, Dept Plant & Soil Sci & Cultivat Bornova, Izmir, Turkiye
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
gdc.description.startpage 112552
gdc.description.volume 357
gdc.description.woscitationindex Science Citation Index Expanded
gdc.identifier.openalex W4410246973
gdc.identifier.pmid 40348343
gdc.identifier.wos WOS:001492818200001
gdc.index.type WoS
gdc.index.type PubMed
gdc.index.type Scopus
gdc.oaire.diamondjournal false
gdc.oaire.impulse 2.0
gdc.oaire.influence 2.4031086E-9
gdc.oaire.isgreen false
gdc.oaire.keywords Nicotiana
gdc.oaire.keywords Gene Expression Regulation, Plant
gdc.oaire.keywords Salt Stress
gdc.oaire.keywords gamma-Aminobutyric Acid
gdc.oaire.keywords Circadian Rhythm
gdc.oaire.keywords Salinity
gdc.oaire.keywords GABA
gdc.oaire.keywords Circadian rhythm
gdc.oaire.keywords Tobacco
gdc.oaire.keywords Abiotic stress
gdc.oaire.popularity 4.0111643E-9
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gdc.openalex.collaboration National
gdc.openalex.fwci 3.8123
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gdc.opencitations.count 0
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gdc.plumx.mendeley 4
gdc.plumx.scopuscites 1
gdc.scopus.citedcount 1
gdc.virtual.author Türkan, İsmail
gdc.wos.citedcount 1
project.funder.name Ege University Research Foundation [FYL-2021-23116]
publicationvolume.volumeNumber 357
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