Gene expression profile classification: A review

dc.contributor.author Musa H. Asyali
dc.contributor.author Dilek Colak
dc.contributor.author Omer Demirkaya
dc.contributor.author Mehmet S. Inan
dc.contributor.author Asyali, Musa H.
dc.contributor.author Colak, Dilek
dc.contributor.author Demirkaya, Omer
dc.contributor.author Inan, Mehmet S.
dc.date JAN
dc.date.accessioned 2025-10-06T16:20:59Z
dc.date.issued 2006
dc.description.abstract In this review we have discussed the class-prediction and discovery methods that are applied to gene expression data along with the implications of the findings. We attempted to present a unified approach that considers both class-prediction and class-discovery. We devoted a substantial part of this review to an overview of pattern classification/recognition methods and discussed important issues such as preprocessing of gene expression data curse of dimensionality feature extraction/selection and measuring or estimating classifier performance. We discussed and summarized important properties such as generalizability (sensitivity to overtraining) built-in feature selection ability to report prediction strength and transparency (ease of understanding of the operation) of different class-predictor design approaches to provide a quick and concise reference. We have also covered the topic of biclustering which is an emerging clustering method that processes the entries of the gene expression data matrix in both gene and sample directions simultaneously in detail.
dc.identifier.doi 10.2174/157489306775330615
dc.identifier.issn 1574-8936
dc.identifier.issn 2212-392X
dc.identifier.uri http://dx.doi.org/10.2174/157489306775330615
dc.identifier.uri https://gcris.yasar.edu.tr/handle/123456789/6635
dc.identifier.uri https://doi.org/10.2174/157489306775330615
dc.language.iso English
dc.publisher BENTHAM SCIENCE PUBL LTD
dc.relation.ispartof Current Bioinformatics
dc.rights info:eu-repo/semantics/closedAccess
dc.source CURRENT BIOINFORMATICS
dc.subject CDNA MICROARRAY DATA, FUZZY C-MEANS, STATISTICAL PATTERN-RECOGNITION, 2-WAY CLUSTERING ANALYSIS, NORMALIZATION METHODS, FEATURE-SELECTION, SAMPLE-SIZE, NONPARAMETRIC METHODS, MAXIMUM-LIKELIHOOD, CANCER
dc.title Gene expression profile classification: A review
dc.type Review
dspace.entity.type Publication
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gdc.author.wosid Colak, Dilek/IQT-4246-2023
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gdc.description.department
gdc.description.departmenttemp King Faisal Specialist Hosp & Res Ctr, Dept Biostat Epidemiol & Sci Comp, Riyadh 11211, Saudi Arabia; King Faisal Specialist Hosp & Res Ctr, Dept Biomed Phys, Riyadh 11211, Saudi Arabia; King Faisal Specialist Hosp & Res Ctr, Dept Genet, Riyadh 11211, Saudi Arabia
gdc.description.endpage 73
gdc.description.issue 1
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
gdc.description.startpage 55
gdc.description.volume 1
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gdc.opencitations.count 101
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