Proteomic profiling of an extreme halophyte Schrenkiella parvula with accelerated root elongation under mild salt stress.

dc.contributor.author Keriman Şekerci
dc.contributor.author Nahoko Higashitani
dc.contributor.author Rengin Özgür Uzilday
dc.contributor.author B. Uzilday
dc.contributor.author Atsushi Higashitani
dc.contributor.author I. Turkan
dc.contributor.author Ozgur, Rengin
dc.contributor.author Şekerci, Keriman
dc.contributor.author Turkan, Ismail
dc.contributor.author Higashitani, Nahoko
dc.contributor.author Higashitani, Atsushi
dc.contributor.author Uzilday, Baris
dc.date.accessioned 2025-10-06T17:49:00Z
dc.date.issued 2024
dc.description.abstract Increased salinity in soil is one of the impacts of climate change and a major problem for crop cultivation. Halophytes have the ability to survive in hypersaline environments and investigating their adaptation mechanisms is effective in imparting salt tolerance to plants. Recently we discovered a strategy by the extreme halophyte Schrenkiella parvula to promote primary root elongation a morpho-physiological response that may be given to have access to groundwater sources while reducing meristem DNA replication root hair development and biomass at moderate salinities around 100 mM NaCl. However when NaCl concentration exceeds 200 mM seedling root elongation is inhibited and seedlings change to respond to severe stress induced by salinity. To understand the interesting physiological and molecular mechanisms underlying primary root elongation at moderate salinity we performed a proteomic analysis using two-dimensional gel electrophoresis and MALDI-TOF MS. Ultimately a total of 300 different proteins were identified of which 20 showed significant increases and 25 showed significant decreases at 100 mM NaCl. Among the increased proteins proteins responding to abiotic stress such as glutathione transferases were found and among the decreased proteins proteins involved in glycolysis purine nucleotide synthesis and protein synthesis were found. Accumulation levels of proline an osmotic regulator that inhibits root growth were lower in S. parvula than in A. thaliana. On the other hand interestingly the expression levels of fructose-bisphosphate aldolase sucrose phosphatase and α-subunit of acetyl-CoA carboxylase increased. In addition increases in P5CDH an enzyme in the proline catabolism process and decreases in GLN and GDH in glutamate synthesis in S. parvula suggest that these may lead to a fine-tuning of proline content. For annexins a family of calcium-binding and membrane-bound proteins that regulate plant tolerance moderate salt treatment showed a significant decrease in SpANN7 a non-significant downtrend for SpANN2 but no change for SpANN1. These findings suggest that the 100 mM NaCl does not create a serious stress for S. parvula. We also performed gene expression analysis of these altered proteins between S. parvula and A. thaliana. Taken together in S. parvula roots 100 mM NaCl partially induced the redox homeostasis system stress response and proline-mediated osmoregulation moderately suppressing carbon metabolism nucleotide and protein synthesis to accelerate primary root elongation. © 2024 Elsevier B.V. All rights reserved.
dc.description.sponsorship JSPS KAKENHI [JP18H03947]; Ministry of Education, Culture, Sports, Science, and Technology (MEXT)
dc.description.sponsorship Japan Society for the Promotion of Science, JSPS, (JP18H03947); Japan Society for the Promotion of Science, JSPS; Ministry of Education, Culture, Sports, Science and Technology, MEXT
dc.description.sponsorship We would like to thank Drs. Shusei Sato and Masaru Bamba for their support in proteome analyses. We are also grateful to Dr. Mika Teranishi, Ms. Hiroko Yamaguchi and Ms. Miki Otsuka for the technical support. This work was funded in part by JSPS KAKENHI grant number JP18H03947 (A.H). K.Ş obtained a scholarship from the Ministry of Education, Culture, Sports, Science, and Technology (MEXT).
dc.identifier.doi 10.1016/j.stress.2024.100357
dc.identifier.issn 2667064X
dc.identifier.issn 2667-064X
dc.identifier.scopus 2-s2.0-85185176149
dc.identifier.uri https://www.scopus.com/inward/record.uri?eid=2-s2.0-85185176149&doi=10.1016%2Fj.stress.2024.100357&partnerID=40&md5=ec35f98dc41615502655b11130483d44
dc.identifier.uri https://gcris.yasar.edu.tr/handle/123456789/8231
dc.identifier.uri https://doi.org/10.1016/j.stress.2024.100357
dc.language.iso English
dc.publisher Elsevier B.V.
dc.relation.ispartof Plant Stress
dc.rights info:eu-repo/semantics/openAccess
dc.source Plant Stress
dc.subject Halophyte, Moderate Salinity, Osmolytes, Proteomics, Redox Homeostasis
dc.subject Osmolytes
dc.subject Redox Homeostasis
dc.subject Halophyte
dc.subject Moderate Salinity
dc.subject Proteomics
dc.title Proteomic profiling of an extreme halophyte Schrenkiella parvula with accelerated root elongation under mild salt stress.
dc.type Article
dspace.entity.type Publication
gdc.author.id Uzilday, Baris/0000-0001-8168-056X
gdc.author.id Higashitani, Atsushi/0000-0001-6920-0594
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gdc.author.wosid Ozgur, Rengin/AAK-3689-2021
gdc.author.wosid Uzilday, Baris/J-2473-2013
gdc.author.wosid Higashitani, Atsushi/AAT-9617-2021
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gdc.description.department
gdc.description.departmenttemp [Sekerci, Keriman; Higashitani, Nahoko; Ozgur, Rengin; Uzilday, Baris; Higashitani, Atsushi] Tohoku Univ, Grad Sch Life Sci, Sendai 9808577, Japan; [Ozgur, Rengin; Uzilday, Baris; Turkan, Ismail] Ege Univ, Fac Sci, Dept Biol, Izmir, Turkiye; [Turkan, Ismail] Yasar Univ, Fac Agr Sci & Technol, Dept Soil Sci & Plant Nutr, TR-35100 Izmir, Turkiye
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
gdc.description.startpage 100357
gdc.description.volume 11
gdc.description.woscitationindex Emerging Sources Citation Index
gdc.identifier.openalex W4391026543
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gdc.oaire.keywords Proteomics
gdc.oaire.keywords Osmolytes
gdc.oaire.keywords Redox Homeostasis
gdc.oaire.keywords Halophyte
gdc.oaire.keywords Moderate salinity
gdc.oaire.keywords QK900-989
gdc.oaire.keywords Plant ecology
gdc.oaire.keywords Moderate Salinity
gdc.oaire.keywords Redox homeostasis
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gdc.virtual.author Türkan, İsmail
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person.identifier.scopus-author-id Şekerci- Keriman (58080155100), Higashitani- Nahoko (57213580968), Özgür Uzilday- Rengin (25925354400), Uzilday- B. (54407552700), Higashitani- Atsushi (7003914625), Turkan- I. (6602343431)
project.funder.name We would like to thank Drs. Shusei Sato and Masaru Bamba for their support in proteome analyses. We are also grateful to Dr. Mika Teranishi Ms. Hiroko Yamaguchi and Ms. Miki Otsuka for the technical support. This work was funded in part by JSPS KAKENHI grant number JP18H03947 (A.H). K.Ş obtained a scholarship from the Ministry of Education Culture Sports Science and Technology (MEXT).
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