Discriminant-based bistability analysis of a TMG-induced lac operon model supported with boundedness and local stability results
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Date
2016
Authors
Neslihan Avcu
Güleser Kalayci Demir
Ferhan Pekergin
Hakan Alyuruk
Levent Çavaş
Cüneyt Güzeliş
Journal Title
Journal ISSN
Volume Title
Publisher
Turkiye Klinikleri Journal of Medical Sciences Talapapa Bulvary no. 102 Hamammonu 1 06230
Open Access Color
GOLD
Green Open Access
Yes
OpenAIRE Downloads
0
OpenAIRE Views
6
Publicly Funded
No
Abstract
This paper presents the results of a theoretical and numerical study on the analysis of bistable behavior of the most studied gene regulatory network the lac operon in terms of the model parameters. The boundedness of the state variables for the considered model are demonstrated the parameter values providing the existence of the multiple equilibria and thus the bistable behavior are determined and a local stability analysis of the equilibria is performed. The parameter region yielding the existence of multiple equilibria is determined in an algebraic way based on discriminants. The model given in the state equation form is defined by the ordinary differential equations with the rational right-hand sides constituted within Hill and Michaelis-Menten approaches based on enzyme kinetics. The presented method can also be used in the parametric studies of other gene regulatory and metabolic networks given by state equations with rational right hand sides. © 2016 Elsevier B.V. All rights reserved.
Description
Keywords
Bistability, Discriminant, Gene Regulatory Networks, Lac Operon, Tmg, Differential Equations, Enzyme Kinetics, Genes, Optical Bistability, Ordinary Differential Equations, Discriminant, Gene Regulatory Networks, Lac Operon, Local Stability Analysis, Metabolic Network, Michaelis-menten, Multiple Equilibrium, Parameter Regions, Equations Of State, Differential equations, Enzyme kinetics, Genes, Optical bistability, Ordinary differential equations, Discriminant, Gene regulatory networks, Lac operon, Local stability analysis, Metabolic network, Michaelis-Menten, Multiple equilibrium, Parameter regions, Equations of state
Fields of Science
0301 basic medicine, 0303 health sciences, 03 medical and health sciences
Citation
WoS Q
Scopus Q

OpenCitations Citation Count
5
Source
TURKISH JOURNAL OF ELECTRICAL ENGINEERING & COMPUTER SCIENCES
Volume
24
Issue
Start Page
719
End Page
732
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Citations
CrossRef : 5
Scopus : 7
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